JCI Insight - Single-cell analysis of fate-mapped macrophages reveals heterogeneity, including stem-like properties, during atherosclerosis progression and regression
Single-Cell Trajectory Analysis Using Monocle 2 and scGPS Pseudotime... | Download Scientific Diagram
Cellular Differentiation Using Trajectory Analysis & Single Cell RNA-Seq Data – Partek Inc
Trajectory-based differential expression analysis for single-cell sequencing data | Nature Communications
Single-cell transcriptome analysis reveals TOX as a promoting factor for T cell exhaustion and a predictor for anti-PD-1 responses in human cancer | Genome Medicine | Full Text
Generalized and scalable trajectory inference in single-cell omics data with VIA | Nature Communications
Pseudotime analysis in 5-plex time-course experiment. (A) Monocle... | Download Scientific Diagram
Global Dynamic Molecular Profiles of Stomatal Lineage Cell Development by Single-Cell RNA Sequencing | bioRxiv
Single-cell RNA-Seq Trajectory Analysis Review - BioTuring's Blog
Tutorials — Scanpy 1.9.1 documentation
Single-cell trajectory analysis
The single cell pseudotime estimation problem. (A) Single cells at... | Download Scientific Diagram
Spatiotemporal Developmental Trajectories in the Arabidopsis Root Revealed Using High-Throughput Single-Cell RNA Sequencing - ScienceDirect
Unsupervised Trajectory Analysis of Single-Cell RNA-Seq and Imaging Data Reveals Alternative Tuft Cell Origins in the Gut: Cell Systems
Single-cell RNA-Seq Trajectory Analysis Review - BioTuring's Blog
Monocle
Pathologic evolution-related Gene Analysis based on both single-cell and bulk transcriptomics in Colorectal Cancer
PseudotimeDE: inference of differential gene expression along cell pseudotime with well-calibrated p-values from single-cell RNA sequencing data | bioRxiv
Monocle
15 Pseudotime Cell Trajectories | ANALYSIS OF SINGLE CELL RNA-SEQ DATA
Unsupervised Trajectory Analysis of Single-Cell RNA-Seq and Imaging Data Reveals Alternative Tuft Cell Origins in the Gut: Cell Systems
Chapter 10 Trajectory Analysis | Advanced Single-Cell Analysis with Bioconductor
PseudotimeDE, statistical method that outperforms existing methods in its detection power | UCLA Computational Medicine
